Research

Publications

The .bib file associated with all my publications (last update : October 2026).

Preprints

• Orlane Rossini, Shafi Mahmud, Nikolay Shirokikh, Alice Cleynen. Multi-omic dissection of RNA control reveals convergent cis-regulatory programs during glucose starvation in yeast. 2026. https://doi.org/10.64898/2026.07.20.739609

• Orlane Rossini, Meritxell Vinyals, Alice Cleynen, Benoîte de Saporta, Régis Sabbadin. Bayes-Adaptive Impulse Control of Piecewise-Deterministic Markov Processes. 2026. hal-05054392v3

• Bridging Impulse Control of Piecewise Deterministic Markov Processes and Markov Decision Processes: Frameworks, Extensions, and Open Challenges, in arXiv:2501.04120 by A. Cleynen, B. de Saporta, O. Rossini, R. Sabbadin, A. Vernay, April 2025

Published

-[1] A refined Saccharomyces cerevisiae reference transcriptome from direct RNA sequencing, with a reusable pipeline for UTR annotation updates, FEMS Yeast Research, Orlane Rossini, Alice Cleynen, Nikolay E Shirokikh, 2026, https://doi.org/10.1093/femsyr/foag052

In Proceedings of Conferences

• July 2024: Journée Santé et IA, PFIA, Deep Reinforcement Learning for Controlled Piecewise Deterministic Markov Process in Cancer Treatment Follow-up, Université de la Rochelle, France [paper]

• May 2024: Journées de Statistique, Deep reinforcement learning for controlled piecewise deterministic Markov process in cancer treatment follow-up, Université de Bordeaux, France [paper]

• July 2023: Journées de Statistique, An example of medical treatment optimization under model uncertainty, Université libre de Bruxelles, Belgique [paper]

Book chapters

• CLEYNEN, A., DE SAPORTA, B., ROSSINI, O., SABBADIN, R. and VERNAY, A. (2025). Controlled Hidden Semi-Markov Models. In A Comprehensive Guide to HSMM (eds N. Peyrard and B. Saporta). https://doi.org/10.1002/9781394427581.ch6